LOCUS AEE73673.1 355 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana cyclophilin 38 protein. ACCESSION CP002686-112 PROTEIN_ID AEE73673.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /gene="CYP38" /locus_tag="AT3G01480" /gene_synonym="ARABIDOPSIS CYCLOPHILIN 38" /gene_synonym="ATCYP38" /gene_synonym="cyclophilin 38" /gene_synonym="F4P13.3" /gene_synonym="F4P13_3" /inference="Similar to RNA sequence, EST:INSD:EL136117.1,INSD:EH929089.1,INSD:EH842928.1, INSD:AV441755.1,INSD:EG508836.1,INSD:BP781373.1, INSD:EH830332.1,INSD:DR296556.1,INSD:ES086828.1, INSD:CB262450.1,INSD:EL044295.1,INSD:ES118927.1, INSD:EL116974.1,INSD:EL337440.1,INSD:DR296552.1, INSD:EH880894.1,INSD:EL314360.1,INSD:EL989854.1, INSD:EH967894.1,INSD:AV802274.1,INSD:EH801975.1, INSD:EL014489.1,INSD:EL136489.1,INSD:EL289943.1, INSD:EH875653.1,INSD:EL228570.1,INSD:EH823149.1, INSD:EL259087.1,INSD:BP856616.1,INSD:EG508846.1, INSD:EH859187.1,INSD:BP623389.1,INSD:BP650126.1, INSD:EL139450.1,INSD:EH965253.1,INSD:EL030369.1, INSD:ES007607.1,INSD:EH909802.1,INSD:AV822201.1, INSD:EL197895.1,INSD:ES004018.1,INSD:DR296555.1, INSD:EH872768.1,INSD:DR296553.1,INSD:EL082147.1, INSD:EH838245.1,INSD:BP600218.1,INSD:EH994601.1, INSD:EH800180.1,INSD:EL073939.1,INSD:EH881752.1, INSD:EL209686.1,INSD:EL261162.1,INSD:AA395048.1, INSD:EH855175.1,INSD:EH821110.1,INSD:EL293490.1, INSD:EL228316.1,INSD:EH890113.1,INSD:EH872196.1, INSD:EH973450.1,INSD:EH818220.1,INSD:EL282815.1, INSD:EH950816.1,INSD:BP864914.1,INSD:EL204783.1, INSD:EH802063.1,INSD:EL235209.1,INSD:EL092155.1, INSD:BP847954.1,INSD:F14183.1,INSD:EH991050.1, INSD:EH939816.1,INSD:EL151175.1,INSD:EH847658.1, INSD:EL124633.1,INSD:EH856522.1,INSD:EL275164.1, INSD:EL313606.1,INSD:ES142119.1,INSD:AA712374.1, INSD:EL168661.1,INSD:BP790067.1,INSD:EL021497.1, INSD:BP843868.1,INSD:EH892003.1,INSD:EL055550.1, INSD:EL179318.1,INSD:EL242019.1,INSD:DR296554.1, INSD:EL121815.1,INSD:EL220917.1,INSD:DR296551.1, INSD:EL281942.1,INSD:BP834025.1,INSD:EL179303.1, INSD:ES070132.1,INSD:BP807815.1,INSD:EH821014.1, INSD:EL177777.1,INSD:EH959446.1,INSD:BP638504.1, INSD:EL134457.1,INSD:AV797246.1,INSD:EL250938.1, INSD:AV797448.1,INSD:EL063287.1,INSD:DR347998.1, INSD:ES014923.1,INSD:EH799866.1,INSD:EL168548.1, INSD:EL246315.1,INSD:EL111865.1,INSD:EH954078.1, INSD:AV817020.1,INSD:EH901845.1,INSD:BP844903.1, INSD:DR376400.1,INSD:BP782830.1,INSD:DR296550.1, INSD:EL111983.1,INSD:EL335102.1,INSD:BP862711.1, INSD:EL295772.1,INSD:EH900367.1,INSD:DR296549.1" /note="cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT3G01480" /db_xref="Araport:AT3G01480" intron_pos 48:0 (1/4) intron_pos 146:0 (2/4) intron_pos 212:2 (3/4) intron_pos 291:1 (4/4) BEGIN 1 MAAAFASLPT FSVVNSSRFP RRRIGFSCSK KPLEVRCSSG NTRYTKQRGA FTSLKECAIS 61 LALSVGLMVS VPSIALPPNA HAVANPVIPD VSVLISGPPI KDPEALLRYA LPIDNKAIRE 121 VQKPLEDITD SLKIAGVKAL DSVERNVRQA SRTLQQGKSI IVAGFAESKK DHGNEMIEKL 181 EAGMQDMLKI VEDRKRDAVA PKQKEILKYV GGIEEDMVDG FPYEVPEEYR NMPLLKGRAS 241 VDMKVKIKDN PNIEDCVFRI VLDGYNAPVT AGNFVDLVER HFYDGMEIQR SDGFVVQTGD 301 PEGPAEGFID PSTEKTRTVP LEIMVTGEKT PFYGSTLEVS LSKSLLVRDL YYIVF //