LOCUS       AEE27226.1               644 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION   CP002684-14
PROTEIN_ID  AEE27226.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 30427671)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 30427671)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 30427671)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     protein         /gene="LHY"
                     /locus_tag="AT1G01060"
                     /gene_synonym="LATE ELONGATED HYPOCOTYL"
                     /gene_synonym="LATE ELONGATED HYPOCOTYL 1"
                     /gene_synonym="LHY1"
                     /gene_synonym="T25K16.6"
                     /gene_synonym="T25K16_6"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR262753.1,INSD:EG520850.1,INSD:AV442073.1,
                     INSD:EL285160.1,INSD:EH811528.1,INSD:AV793100.1,
                     INSD:EL221576.1,INSD:AV807028.1,INSD:BX839544.1,
                     INSD:DR262754.1,INSD:AA713203.1,INSD:AV809310.1,
                     INSD:AA650979.1,INSD:AV786398.1,INSD:AV793959.1,
                     INSD:EL071273.1,INSD:BX840279.1,INSD:BP787483.1,
                     INSD:AV805408.1,INSD:AV439916.1,INSD:DR750570.1,
                     INSD:CF773267.1,INSD:R30439.1,INSD:AV525957.1,
                     INSD:DR750341.1,INSD:EG517069.1,INSD:EH853476.1,
                     INSD:DR262751.1,INSD:EH900352.1,INSD:EH957137.1,
                     INSD:AV528276.1,INSD:BP793781.1,INSD:AV518592.1,
                     INSD:DR262755.1,INSD:BP611805.1,INSD:DR262752.1,
                     INSD:EL210103.1,INSD:BP783401.1,INSD:AV519727.1,
                     INSD:EH965397.1,INSD:BX836221.1,INSD:AV794517.1,
                     INSD:EH897895.1,INSD:BP785164.1,INSD:AV519209.1,
                     INSD:EL125752.1,INSD:EG520849.1,INSD:EG517068.1,
                     INSD:EL187904.1,INSD:EL098580.1,INSD:EH906782.1,
                     INSD:EL269840.1,INSD:EL310869.1,INSD:AV816640.1,
                     INSD:EH922478.1,INSD:BX835664.1,INSD:EL011803.1,
                     INSD:EH968369.1,INSD:EL201800.1,INSD:EL206414.1,
                     INSD:AV792580.1,INSD:BP604428.1,INSD:AV519732.1,
                     INSD:EL069143.1"
                     /note="LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro
                     DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb,
                     DNA-binding (InterPro:IPR014778), Homeodomain-like
                     (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF
                     class (InterPro:IPR006447), HTH transcriptional regulator,
                     Myb-type, DNA-binding (InterPro:IPR017930); BEST
                     Arabidopsis thaliana protein match is: circadian clock
                     associated 1 (TAIR:AT2G46830.1); Has 2567 Blast hits to
                     2041 proteins in 275 species: Archae - 2; Bacteria - 252;
                     Metazoa - 294; Fungi - 166; Plants - 1044; Viruses - 30;
                     Other Eukaryotes - 779 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G01060"
                     /db_xref="TAIR:AT1G01060"
     intron_pos      14:0 (1/6)
     intron_pos      51:1 (2/6)
     intron_pos      72:0 (3/6)
     intron_pos      150:0 (4/6)
     intron_pos      177:0 (5/6)
     intron_pos      534:0 (6/6)
BEGIN
        1 MDTNTSGEEL LAKARKPYTI TKQRERWTED EHERFLEALR LYGRAWQRIE EHIGTKTAVQ
       61 IRSHAQKFFT KLEKEAEVKG IPVCQALDIE IPPPRPKRKP NTPYPRKPGN NGTSSSQVSS
      121 AKDAKLVSSA SSSQLNQAFL DLEKMPFSEK TSTGKENQDE NCSGVSTVNK YPLPTKVSGD
      181 IETSKTSTVD NAVQDVPKKN KDKDGNDGTT VHSMQNYPWH FHADIVNGNI AKCPQNHPSG
      241 MVSQDFMFHP MREETHGHAN LQATTASATT TASHQAFPAC HSQDDYRSFL QISSTFSNLI
      301 MSTLLQNPAA HAAATFAASV WPYASVGNSG DSSTPMSSSP PSITAIAAAT VAAATAWWAS
      361 HGLLPVCAPA PITCVPFSTV AVPTPAMTEM DTVENTQPFE KQNTALQDQN LASKSPASSS
      421 DDSDETGVTK LNADSKTNDD KIEEVVVTAA VHDSNTAQKK NLVDRSSCGS NTPSGSDAET
      481 DALDKMEKDK EDVKETDENQ PDVIELNNRK IKMRDNNSNN NATTDSWKEV SEEGRIAFQA
      541 LFARERLPQS FSPPQVAENV NRKQSDTSMP LAPNFKSQDS CAADQEGVVM IGVGTCKSLK
      601 TRQTGFKPYK RCSMEVKESQ VGNINNQSDE KVCKRLRLEG EAST
//