LOCUS AEE27226.1 644 aa PRT PLN 20-JUL-2017 DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein. ACCESSION CP002684-14 PROTEIN_ID AEE27226.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 30427671) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F., Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R., Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J., Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B., Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J., Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L., Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S., Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X., Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J., Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G., Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H., Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H., Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T., Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G., Fraser,C.M., Venter,J.C. and Davis,R.W. TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 816-820 (2000) PUBMED 11130712 REFERENCE 2 (bases 1 to 30427671) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 30427671) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 30427671) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="1" /ecotype="Columbia" protein /gene="LHY" /locus_tag="AT1G01060" /gene_synonym="LATE ELONGATED HYPOCOTYL" /gene_synonym="LATE ELONGATED HYPOCOTYL 1" /gene_synonym="LHY1" /gene_synonym="T25K16.6" /gene_synonym="T25K16_6" /inference="Similar to RNA sequence, EST:INSD:DR262753.1,INSD:EG520850.1,INSD:AV442073.1, INSD:EL285160.1,INSD:EH811528.1,INSD:AV793100.1, INSD:EL221576.1,INSD:AV807028.1,INSD:BX839544.1, INSD:DR262754.1,INSD:AA713203.1,INSD:AV809310.1, INSD:AA650979.1,INSD:AV786398.1,INSD:AV793959.1, INSD:EL071273.1,INSD:BX840279.1,INSD:BP787483.1, INSD:AV805408.1,INSD:AV439916.1,INSD:DR750570.1, INSD:CF773267.1,INSD:R30439.1,INSD:AV525957.1, INSD:DR750341.1,INSD:EG517069.1,INSD:EH853476.1, INSD:DR262751.1,INSD:EH900352.1,INSD:EH957137.1, INSD:AV528276.1,INSD:BP793781.1,INSD:AV518592.1, INSD:DR262755.1,INSD:BP611805.1,INSD:DR262752.1, INSD:EL210103.1,INSD:BP783401.1,INSD:AV519727.1, INSD:EH965397.1,INSD:BX836221.1,INSD:AV794517.1, INSD:EH897895.1,INSD:BP785164.1,INSD:AV519209.1, INSD:EL125752.1,INSD:EG520849.1,INSD:EG517068.1, INSD:EL187904.1,INSD:EL098580.1,INSD:EH906782.1, INSD:EL269840.1,INSD:EL310869.1,INSD:AV816640.1, INSD:EH922478.1,INSD:BX835664.1,INSD:EL011803.1, INSD:EH968369.1,INSD:EL201800.1,INSD:EL206414.1, INSD:AV792580.1,INSD:BP604428.1,INSD:AV519732.1, INSD:EL069143.1" /note="LATE ELONGATED HYPOCOTYL (LHY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1); Has 2567 Blast hits to 2041 proteins in 275 species: Archae - 2; Bacteria - 252; Metazoa - 294; Fungi - 166; Plants - 1044; Viruses - 30; Other Eukaryotes - 779 (source: NCBI BLink)." /db_xref="Araport:AT1G01060" /db_xref="TAIR:AT1G01060" intron_pos 14:0 (1/6) intron_pos 51:1 (2/6) intron_pos 72:0 (3/6) intron_pos 150:0 (4/6) intron_pos 177:0 (5/6) intron_pos 534:0 (6/6) BEGIN 1 MDTNTSGEEL LAKARKPYTI TKQRERWTED EHERFLEALR LYGRAWQRIE EHIGTKTAVQ 61 IRSHAQKFFT KLEKEAEVKG IPVCQALDIE IPPPRPKRKP NTPYPRKPGN NGTSSSQVSS 121 AKDAKLVSSA SSSQLNQAFL DLEKMPFSEK TSTGKENQDE NCSGVSTVNK YPLPTKVSGD 181 IETSKTSTVD NAVQDVPKKN KDKDGNDGTT VHSMQNYPWH FHADIVNGNI AKCPQNHPSG 241 MVSQDFMFHP MREETHGHAN LQATTASATT TASHQAFPAC HSQDDYRSFL QISSTFSNLI 301 MSTLLQNPAA HAAATFAASV WPYASVGNSG DSSTPMSSSP PSITAIAAAT VAAATAWWAS 361 HGLLPVCAPA PITCVPFSTV AVPTPAMTEM DTVENTQPFE KQNTALQDQN LASKSPASSS 421 DDSDETGVTK LNADSKTNDD KIEEVVVTAA VHDSNTAQKK NLVDRSSCGS NTPSGSDAET 481 DALDKMEKDK EDVKETDENQ PDVIELNNRK IKMRDNNSNN NATTDSWKEV SEEGRIAFQA 541 LFARERLPQS FSPPQVAENV NRKQSDTSMP LAPNFKSQDS CAADQEGVVM IGVGTCKSLK 601 TRQTGFKPYK RCSMEVKESQ VGNINNQSDE KVCKRLRLEG EAST //