LOCUS DE990817 792 bp mRNA linear GSS 27-AUG-2010
DEFINITION Mus musculus mRNA, NAIST Gene Trap Library V6.4-pUPAT-egfp3ic,
clone: 42v-397.
ACCESSION DE990817
VERSION DE990817.1
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 792)
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2010)
Contact:Kaoru Fukami-Kobayashi
RIKEN, BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki
305-0074, Japan
URL :http://www.brc.riken.jp/
REFERENCE 2
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Sequence tag generated by 3' RACE using total RNA from
gene-trapped mouse ES-cell line.
JOURNAL Unpublished
REFERENCE 3
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells.
JOURNAL Nucleic Acids Res. 33, e20 (2005)
COMMENT Sequence tag generated by 3' RACE using total RNA from
gene-trapped ES-cell line.
FEATURES Location/Qualifiers
source 1..792
/cell_type="Embryonic Stem Cell"
/clone="42v-397"
/db_xref="taxon:10090"
/mol_type="mRNA"
/note="GSS name: NAISTrap_42v1397"
/note="Vector: pUPAT-egfp3ic"
/note="clone_lib: NAIST Gene Trap Library
V6.4-pUPAT-egfp3ic"
/organism="Mus musculus"
/sex="male"
/strain="(C57BL/6J x 129S4/SvJae)F1"
BASE COUNT 187 a 190 c 165 g 182 t
ORIGIN
1 acnnnancgn gnncttnnnn gannnnnnnn ncattatgcc agtacattca ggcttctaaa
61 gccagggatg gtgccagccc tttcatttca agtacgactg aaggagaaaa ttttgagcag
121 acgccattga gacgaacatt caagtctaag gtccttgccc gataccctga gaatgtagac
181 tggaatccct ttgatcagga tgcantanga atgctgtgca tgcccaaagg gctggcattc
241 aagacccagg ctgatcccag ggagccacag ttccatgcct ttattatcac aagggaggat
301 ggttctcgga catttgggtt tgctcttacc ttttatgaag aagtgaccag caagcaaatc
361 tgcagtgcaa tgcagaccct ctaccacatg cacaatgctg agtatgatgt ccttcatgct
421 ccacttgctg atggtggaga ccagagtggc atggaagatg gtgaaggcat tcctgggacc
481 aagctgcagc gcttcaactc ctatgatatt agcagggaca cactctatgt ctctaaatgc
541 atctgtctca ttacacccat gtctttcatg aaggcatgtc ggagtgtgct gcagcagctc
601 caccaggcag tcacatcgcc tcagccccct cctctgnnnn ntganannna canatannan
661 ntacncnnnn nngngccact tccacctcct gnnnnctccc taaagnttnc nggggnnnta
721 tggggcnann atcnnncaga nancaagtac caatgagctt cnnctattcn attttcccnt
781 caanangtct tt
//