LOCUS DE990815 880 bp mRNA linear GSS 27-AUG-2010
DEFINITION Mus musculus mRNA, NAIST Gene Trap Library V6.4-pUPAT-egfp3ic,
clone: 42v-381.
ACCESSION DE990815
VERSION DE990815.1
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 880)
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2010)
Contact:Kaoru Fukami-Kobayashi
RIKEN, BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki
305-0074, Japan
URL :http://www.brc.riken.jp/
REFERENCE 2
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Sequence tag generated by 3' RACE using total RNA from
gene-trapped mouse ES-cell line.
JOURNAL Unpublished
REFERENCE 3
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells.
JOURNAL Nucleic Acids Res. 33, e20 (2005)
COMMENT Sequence tag generated by 3' RACE using total RNA from
gene-trapped ES-cell line.
FEATURES Location/Qualifiers
source 1..880
/cell_type="Embryonic Stem Cell"
/clone="42v-381"
/db_xref="taxon:10090"
/mol_type="mRNA"
/note="GSS name: NAISTrap_42v1381"
/note="Vector: pUPAT-egfp3ic"
/note="clone_lib: NAIST Gene Trap Library
V6.4-pUPAT-egfp3ic"
/organism="Mus musculus"
/sex="male"
/strain="(C57BL/6J x 129S4/SvJae)F1"
BASE COUNT 147 a 220 c 231 g 188 t
ORIGIN
1 tttgcnggta agtaatgctt tttttttttn cnnnnnnnnn ttttnnaacc ccccnnaaaa
61 aaaaaaaaaa aaaaaaaaan nnnngggggg nnnnttnntc cccnnnnnng nnngaacgtt
121 gcagccatcc aggagcaggt gttgggcttg ggtgccctgc gcaagctact tcggctgctc
181 gaccgggact cctgcgacac ggtacgagtc aaggctctct tcgccatctc ctgtcttgtc
241 cgagagcagg aggctgggtt gctgcagttc ctccgcctgg atggattctc agtgctgatg
301 cgggccatgc agcagcaagt gcagaagctc aaggtcaagt cagcattcct gctgcagaac
361 ttgctggtgg gccaccctga gcacaaagga accctttgct ccatggggat ggtccagcag
421 ctggtggccc ttgtgaggac agaacacagt cctttccatg agcatgtgct tggagccctg
481 tgcagccttg tgacagattt ccctcagggt gttcgtgaat gccgggagcc tgagctgggc
541 ctggaggaac tgctccgcca ccgctgccag ctgctgcagc agcgtgagga gtaccaggag
601 gagctggagt tctgtgaaaa gctgttacag acctgtttct ctagccctnc cgacgacagc
661 atggntcgct gagnncaggt ggctccttgc tttctntncg ngggaacccc aggcctcctg
721 cctccctccn tcccaggnnn tctctcttan nggattgnca gnnnngtttg ggnnggnnnn
781 ggnnntgcng cccatntntg ggtagcccct ggagggntnn tnanannnng ctggccctnn
841 tccctnnnnn ttnctgncan cnttctnnnc nngncnncng
//