LOCUS DE990800 787 bp mRNA linear GSS 27-AUG-2010
DEFINITION Mus musculus mRNA, NAIST Gene Trap Library V6.4-pUPAT-egfp3ic,
clone: 42v-325.
ACCESSION DE990800
VERSION DE990800.1
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 787)
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2010)
Contact:Kaoru Fukami-Kobayashi
RIKEN, BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki
305-0074, Japan
URL :http://www.brc.riken.jp/
REFERENCE 2
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Sequence tag generated by 3' RACE using total RNA from
gene-trapped mouse ES-cell line.
JOURNAL Unpublished
REFERENCE 3
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells.
JOURNAL Nucleic Acids Res. 33, e20 (2005)
COMMENT Sequence tag generated by 3' RACE using total RNA from
gene-trapped ES-cell line.
FEATURES Location/Qualifiers
source 1..787
/cell_type="Embryonic Stem Cell"
/clone="42v-325"
/db_xref="taxon:10090"
/mol_type="mRNA"
/note="GSS name: NAISTrap_42v1325"
/note="Vector: pUPAT-egfp3ic"
/note="clone_lib: NAIST Gene Trap Library
V6.4-pUPAT-egfp3ic"
/organism="Mus musculus"
/sex="male"
/strain="(C57BL/6J x 129S4/SvJae)F1"
BASE COUNT 157 a 134 c 144 g 171 t
ORIGIN
1 tttgcaggtg ntcctnnngn nnntcnngan nngnttnnnn nccngaagct acgccngtgt
61 tgtgnnntct ttgannnnnn nnnnnacnnn ntgngtgacc tgnngtggaa ggnnnnnnng
121 nnnnctgcgc tgagcgagat ggnggantat atcngncaca accggaacnt gatcgcggag
181 cccatttncc ccgaggncan cnacatgtnn gnnnttnann ngtncnnaac cttgccncnt
241 tcnnnnantn nnncgggagc ananttcgac ccanaanang atgaaccnnn nttagaagca
301 gcctggcctc ntctgcannt tgtttatnna tttttcttan nattttnana gtctccagat
361 ttccaaccca ntatannaaa naaatntntt gnncanaagt ttgtattgca ncttctagag
421 ctgtttgaca gcgaggatcc tcgggagaga gattttctaa aaaccnccct gcacagaatc
481 tatgggaagt tcttangcct gcgtgcttac ntcaggaaac agatcantaa tatattttat
541 aggtttatct atgagacaga nnatcncant ggnatancnn anttactgga gatcttggnn
601 ngtatnatta atgnatttgc cttaccactg anngaggaac ncaagatttn nntgctgaan
661 gngttgctgc ccttgnnnaa ngtgaannnn ntgagtgnct accntccccn gnnggnntnc
721 ngnnncnngn agnntttaga gaaggacnnc ncccncnctg aacngnngnn annggnnnct
781 tctnaaa
//