LOCUS DE990564 865 bp mRNA linear GSS 27-AUG-2010
DEFINITION Mus musculus mRNA, NAIST Gene Trap Library V6.4-pUPAT-egfp3ic,
clone: 36v-56.
ACCESSION DE990564
VERSION DE990564.1
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 865)
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2010)
Contact:Kaoru Fukami-Kobayashi
RIKEN, BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki
305-0074, Japan
URL :http://www.brc.riken.jp/
REFERENCE 2
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Sequence tag generated by 3' RACE using total RNA from
gene-trapped mouse ES-cell line.
JOURNAL Unpublished
REFERENCE 3
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells.
JOURNAL Nucleic Acids Res. 33, e20 (2005)
COMMENT Sequence tag generated by 3' RACE using total RNA from
gene-trapped ES-cell line.
FEATURES Location/Qualifiers
source 1..865
/cell_type="Embryonic Stem Cell"
/clone="36v-56"
/db_xref="taxon:10090"
/mol_type="mRNA"
/note="GSS name: NAISTrap_36v1056"
/note="Vector: pUPAT-egfp3ic"
/note="clone_lib: NAIST Gene Trap Library
V6.4-pUPAT-egfp3ic"
/organism="Mus musculus"
/sex="male"
/strain="(C57BL/6J x 129S4/SvJae)F1"
BASE COUNT 169 a 220 c 198 g 183 t
ORIGIN
1 annnnggnnc cnnnnnnnnn tttttnnnnn nnanttntcn ntgnnncccc cnnnnnaacn
61 ggntgagaag cgatnntnan tgacgacngc tgccttgcct tttacacagt ccatcctctc
121 tcaggtgggt cgtacactgt ctaaggtcca gcaggtgctg agttggtctt atggggaaga
181 tgtgaagcct tttaagcccc ccctgagtga tgctgagttc cacacgtacc tgaatcatga
241 aggtcagctc tcccggcctg aggagttgcg tttgaggatc taccacggcg gtgtggagcc
301 ttcacttcnn aaagtagtat ggcggtacct ccttaatgtg tacccagatg ggctgactgg
361 ccgtgagcgg atggactaca tgaaacgtaa gagccgagag tacnagcagc tcaaaagtga
421 gtgggcccag cgagtgaacc ctgaggacct ggaattcatc cgcagcacag tcctcaagga
481 tgtgctccgc acagaccgag cccatcccta ctacgcaggg cctgaggatg gcccacacct
541 acgggcccta cacgacttgc tcaccaccta tgccgttacc catccacnng tatcatactg
601 ccaggggatg agtgacctgg cctcaccaat tcttgctgtc atggnaccat gaaggncatg
661 cctttgtatg cttctgtggc atcatgaagc gcttagctgc naacttccac cctgatgnnn
721 gtgccatggc cnncaagttt nnccncctca agctgctant ganacatgnt gaccnnnact
781 tctatcannn cnnnnaagaa gnnnngccna tnacntnnnt tcngttncng ctggcngctg
841 nngnnncnnn agcntgaatn ncctt
//