LOCUS DE990450 798 bp mRNA linear GSS 27-AUG-2010
DEFINITION Mus musculus mRNA, NAIST Gene Trap Library TC1-pUPAT-3ic, clone:
16v-31.
ACCESSION DE990450
VERSION DE990450.1
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 798)
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2010)
Contact:Kaoru Fukami-Kobayashi
RIKEN, BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki
305-0074, Japan
URL :http://www.brc.riken.jp/
REFERENCE 2
AUTHORS Ishida,Y., Nakata,H., Yoshiki,A. and Fukami-Kobayashi,K.
TITLE Sequence tag generated by 3' RACE using total RNA from
gene-trapped mouse ES-cell line.
JOURNAL Unpublished
REFERENCE 3
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells.
JOURNAL Nucleic Acids Res. 33, e20 (2005)
COMMENT Sequence tag generated by 3' RACE using total RNA from
gene-trapped ES-cell line.
FEATURES Location/Qualifiers
source 1..798
/cell_type="Embryonic Stem Cell"
/clone="16v-31"
/db_xref="taxon:10090"
/mol_type="mRNA"
/note="GSS name: NAISTrap_16v1031"
/note="Vector: pUPAT-3ic"
/note="clone_lib: NAIST Gene Trap Library TC1-pUPAT-3ic"
/organism="Mus musculus"
/sex="male"
/strain="129S6/SvEvTac"
BASE COUNT 136 a 207 c 188 g 116 t
ORIGIN
1 gaatgagcag gtaagtantg cttttttttt ttnncncccc ccnnttcnaa aancccccnn
61 aaaaaaaaaa ngaaangggg gggnggccng agtnttnccn atttccnccc ccnttnnncc
121 ttctnatgnt ncccnttngg ccncttaggg cgnggcgcng gcccanncnc cncncccncn
181 tccncccann gttngggagg gggnnngggn ggganaaggg gggggncgng nnggggccnn
241 acgggggggt nnagggggga nanngggggg naagggggga agaggngggg gnnnctnagg
301 gtntccnncg ggntgnnccc ggggaggggg ttcaaaaaaa aaaaaaanca agccctggnn
361 ttntcccntt nnccngncnc tcgngcccct nnngggggcc atanctncag ggantngtgn
421 ggnnctcaag ccctcagaga tcancaaggc cactgaaaan atactggctg aggtcctgcc
481 ccgntatcng gaccatagct gctttactgg ggcactgngt gancgncagg ataccgaaan
541 ctgctggaac acnaccncgn ctacatnnnn tncacnngna aagnttatgn angnttnntc
601 ccnttgtntg aanctgncnn acncctcacc cccatacccn gggacgntgn cnnntnataa
661 cccctgctat gcggancccc ctccaccccn caaantngan ccaccngtgn actgnttcnc
721 tacctttatc ccgccccctc cannncccca taaanccngg gcnccagggt ngngnncccn
781 ccccccnccc caaatnct
//