LOCUS CZ905183 719 bp mRNA linear GSS 18-MAY-2010
DEFINITION NAISTrap_26v1006 NAIST Gene Trap Library v6.4-UPAT-egfp3ic Mus
musculus cDNA, genomic survey sequence.
ACCESSION CZ905183
VERSION CZ905183.1
DBLINK BioSample: SAMN00183148
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 719)
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells
JOURNAL Nucleic Acids Res. 33 (2), e20 (2005)
PUBMED 15687378
COMMENT Contact: Ishida Y
Division of Gene Function in Animals
Nara Institute of Science and Technology (NAIST)
8916-5 Takayama-cho, Ikoma-shi, Nara 630-0192, Japan
Tel: 81 743 72 5531
Fax: 81 743 72 5539
Email: ishiday@bs.naist.jp
Sequence tag generated by 3' RACE using total RNA from gene-trapped
ES-cell line.
Class: Gene Trap.
FEATURES Location/Qualifiers
source 1..719
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J x 129/SvJae"
/db_xref="taxon:10090"
/sex="male"
/cell_type="Embryonic Stem Cell"
/clone_lib="SAMN00183148 NAIST Gene Trap Library
v6.4-UPAT-egfp3ic"
/note="Vector: pUPAT-egfp3ic"
BASE COUNT 184 a 168 c 164 g 136 t
ORIGIN
1 tctggagatg catgggatac atgatgagac agnaggngga gantgtnata atacctctga
61 tctccaaccc caagctggac gcangactcg tcgggaagca tgtncatgcc cctattgcga
121 agacagtgag ggaagancct cnggagatcc tggacaaaaa naaacagcac ntttgtcgcn
181 tccaaggatg nngtaaanna tatgnnaana cctcacatct ccgancacnn ttgcgntgga
241 atacagggga gangnnnttc atgtgtnatt ggncatattg tgggaagcgc tttacacgtt
301 cggacnanct tcngagacat aaacgtacac atacaggaga naagancttt gcctgccctg
361 agtgccctaa gngtttcntg aggagtgatc acctgnnaaa gcatctcaag actcaccaga
421 acnagagggg aggcccaggt gnagccctga ntgngcccac attgcccctg gacagtggng
481 naagttcana acgctctgcc nctccttcac cccttattac caccaatatg gnagccatgg
541 gaggacatct gttcagaggg tnttgcccgt cntgccaaca gnggtcatca acgtcatgca
601 ggggacanat ctnnaaancc ntaatatngg gggcaatggt tcccanatta nacncccatn
661 ncnganacat ttcccccaan ccccctaagc ccggnatggn ggtancatgn ttccaaaaa
//