LOCUS CZ905039 667 bp mRNA linear GSS 18-MAY-2010
DEFINITION NAISTrap_16v1057 NAIST Gene Trap Library Tc1-UPAT-3ic Mus musculus
cDNA, genomic survey sequence.
ACCESSION CZ905039
VERSION CZ905039.1
DBLINK BioSample: SAMN00183146
KEYWORDS GSS.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 667)
AUTHORS Shigeoka,T., Kawaichi,M. and Ishida,Y.
TITLE Suppression of nonsense-mediated mRNA decay permits unbiased gene
trapping in mouse embryonic stem cells
JOURNAL Nucleic Acids Res. 33 (2), e20 (2005)
PUBMED 15687378
COMMENT Contact: Ishida Y
Division of Gene Function in Animals
Nara Institute of Science and Technology (NAIST)
8916-5 Takayama-cho, Ikoma-shi, Nara 630-0192, Japan
Tel: 81 743 72 5531
Fax: 81 743 72 5539
Email: ishiday@bs.naist.jp
Sequence tag generated by 3' RACE using total RNA from gene-trapped
ES-cell line.
Class: Gene Trap.
FEATURES Location/Qualifiers
source 1..667
/organism="Mus musculus"
/mol_type="mRNA"
/strain="129 Sv"
/db_xref="taxon:10090"
/sex="male"
/cell_type="Embryonic Stem Cell"
/clone_lib="SAMN00183146 NAIST Gene Trap Library
Tc1-UPAT-3ic"
/note="Vector: pUPAT-3ic"
BASE COUNT 134 a 174 c 158 g 146 t
ORIGIN
1 gggagctgtg tggaattgnt gctgnttgct gctcgctgna gagntacctc tgggtggngg
61 ttgtcctcga gactgtgtgt gctaccctgc gcccatgact gtcagctgcc aggtacacaa
121 ctttgctgcc atcccggagg gcatcccaga ggacagtgag cgcatctncc tgcagaacna
181 tcnnntcacc ttcctccagc agggccactt nagccccgcc atggtcaccc tctggatcta
241 ctccaacaan atcnctttca ttgctcccaa caccttngag ggntttgngc atctggagga
301 gctagacctt ggagacaacc gacagntgcg aacgctggca cccgagacct tncaaggttc
361 tggtgaanct tcacnccctc tacctctata agtgnggact gagcgccctt cccgcaggna
421 tctttggtgg cctgcacagn ctgnnnnntc tnnacnngca gganaaccat atagantacn
481 tcctanatga catgnntgag nacctgggnn atctnantca cttgtttntc catggnaaca
541 agctntggag cctgggccaa ggnatcttcc ggggcctggg gaatctggan cggttgctgc
601 tacatgataa ccagantaca taggggtcnn canaanattt cngngactca aaagataaca
661 tcctctt
//