LOCUS CK334917 597 bp mRNA linear EST 12-MAY-2010
DEFINITION H3123C07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3123C07 3', mRNA sequence.
ACCESSION CK334917
VERSION CK334917.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 597)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3123 row: C column: 07
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..597
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3123C07-3"
/db_xref="taxon:10090"
/clone="H3123C07"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 168 a 137 c 122 g 170 t
ORIGIN
1 ctcattaaac ttgttttaat ggtctcaaaa ttctgtgaca gatttttggt caagttgttt
61 ccattaaaaa gtactgattt tgaaaactaa taacttaaaa ctgccacaca caaaaaaaat
121 ggtccacaac attctttcct tctgaaggtt ttacgatgca ttgttatcat tagccagtct
181 tttactatta aacttaaatg gccaattgag acaaacagtt ctgagaccgt tcttccacca
241 ctgattaaga ctggggtggc aggtgttagg ggtaatattc atttagcctt ctgagctttc
301 tgggcagact tggtgacttt gccagctcca gcagccttct tgtccacagc tttgatgaca
361 cccacagcaa ctgtctgcct catgtcacga acagcaaagc gaccaagtgg agggtagtca
421 gagaagctct caacacatat gggcttgcca gggaccatat caacaatggc agcatcgcca
481 gacttcagga acttggggcc atcttccagc ttcttaccag aacgacgatc gatcttttct
541 ttaagctcag caaacttgca tgctatgtgg gctgtgtgac aatccagaac aggagcg
//