LOCUS CK334759 604 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105F12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105F12 3', mRNA sequence. ACCESSION CK334759 VERSION CK334759.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 604) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3105 row: F column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..604 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105F12-3" /db_xref="taxon:10090" /clone="H3105F12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 180 a 126 c 141 g 157 t ORIGIN 1 attttagtac ttttttatat ctattaaaag aattctaatt tgcacgtctg cagtgtgttc 61 tggagaatca cggagggtcc gatccagtgg gcagggatgg acagaagtcc tttcccccag 121 gaaagattct tgaggttgcc agaaactaag agtgacagat gccattcaga tacatcgtaa 181 gggtgtgtac ataccagtaa tcccaacact gggaagacag agcagaagga tgtcctaagt 241 acaaggcgag cctggtctat atagtgggtt ccaagacagc caaggtcaca tagtgaatga 301 aacccacttt caaaacttcc acaaggactg tccccctttg aagagtctct aaacagcctt 361 gccctacttg ggctggcttg acctttgatt ccttgataat ggcgcctaca ggagtgggat 421 acagagagca acttttacaa tgttaaaagt cttctatgtg gaaataaaga acacccccag 481 gattccacgg ttaactaaag gttccaaggt taactagaga tttccggagt ggggtggtgc 541 aagttaattt atcagtttta aacagctaca aagcgccagg ctctgacaca gtttgacttc 601 taaa //