LOCUS CK334580 389 bp mRNA linear EST 12-MAY-2010 DEFINITION H3058A08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058A08 5', mRNA sequence. ACCESSION CK334580 VERSION CK334580.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 389) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3058 row: A column: 08 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..389 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058A08-5" /db_xref="taxon:10090" /clone="H3058A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 117 a 87 c 76 g 109 t ORIGIN 1 cggcagattt aagtaagtct tccccaacac cgaatgggat tccatcttca gacacagcca 61 acgataccat ggatcctttc catgcttgca gtattcttaa gcaactcaaa acaatgtacg 121 atgaaggaca gttgacagac attgtagtgg aagtggatca cgggaaaaca ttttcctgtc 181 atagaaacgt tcttgctgca atcagcccct acttcagatc catgttcact agcggtctta 241 cagaaagtac tcagaaagaa gttcgaatca ttggtgttga agctgaatca atggatttag 301 tattgaatta tgcctatacc tctagagtta ttctgacaga ggccaatgtt caagccttgt 361 tcactacagc tagcatcttg caaattcct //