LOCUS CK334536 685 bp mRNA linear EST 12-MAY-2010
DEFINITION H3047G03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3047G03 5', mRNA sequence.
ACCESSION CK334536
VERSION CK334536.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 685)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3047 row: G column: 03
Seq primer: M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..685
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3047G03-5"
/db_xref="taxon:10090"
/clone="H3047G03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 238 a 117 c 159 g 171 t
ORIGIN
1 tgagaacaag ttgaacagtg ctaacggcca tgaagaacgt agcaaaaaga gaaaaaaaag
61 caagagcaga agtcgtagtc atgagagaaa aagaagcaaa agtaaagaac ggaaaagaag
121 tagagataga gaaaggaaaa agagcaaaag tcgagagcgg aaacgaagta gaagcaaaga
181 aaggagacga agccgctcac gcagtcggga tagaagattc cgaggccgct acagaagtcc
241 ctagagctga ggaccaaacc aaggcttttt gcttgctggg caagcacaat agcactgagc
301 taaatcccca acccccatga gactattttt aattctgagt tatatattag aaattttttt
361 gttcctttcc tcaagattta cagtctttaa gattgtaagt tttcttaact ggggtgaatt
421 aaatagggga cagatgcttt aaaaatcaga atgctagttt tgttttttaa agatttatta
481 acttatttca agaatgtgag tacagtgtct ctaccttctg acagaccaga agaggacatc
541 agatcccatt atagatggtt gtgggcctcc atgtggttgc tgggaattga actcaggacc
601 tttggaagag cagtcttaac tactgagcca tctctccagc accagaatac ttttttgaga
661 agctattatt gatggctgcc tttta
//