LOCUS CK334536 685 bp mRNA linear EST 12-MAY-2010 DEFINITION H3047G03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3047G03 5', mRNA sequence. ACCESSION CK334536 VERSION CK334536.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 685) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3047 row: G column: 03 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..685 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3047G03-5" /db_xref="taxon:10090" /clone="H3047G03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 238 a 117 c 159 g 171 t ORIGIN 1 tgagaacaag ttgaacagtg ctaacggcca tgaagaacgt agcaaaaaga gaaaaaaaag 61 caagagcaga agtcgtagtc atgagagaaa aagaagcaaa agtaaagaac ggaaaagaag 121 tagagataga gaaaggaaaa agagcaaaag tcgagagcgg aaacgaagta gaagcaaaga 181 aaggagacga agccgctcac gcagtcggga tagaagattc cgaggccgct acagaagtcc 241 ctagagctga ggaccaaacc aaggcttttt gcttgctggg caagcacaat agcactgagc 301 taaatcccca acccccatga gactattttt aattctgagt tatatattag aaattttttt 361 gttcctttcc tcaagattta cagtctttaa gattgtaagt tttcttaact ggggtgaatt 421 aaatagggga cagatgcttt aaaaatcaga atgctagttt tgttttttaa agatttatta 481 acttatttca agaatgtgag tacagtgtct ctaccttctg acagaccaga agaggacatc 541 agatcccatt atagatggtt gtgggcctcc atgtggttgc tgggaattga actcaggacc 601 tttggaagag cagtcttaac tactgagcca tctctccagc accagaatac ttttttgaga 661 agctattatt gatggctgcc tttta //