LOCUS CK334345 665 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018C10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018C10 5', mRNA sequence. ACCESSION CK334345 VERSION CK334345.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 665) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3018 row: C column: 10 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..665 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018C10-5" /db_xref="taxon:10090" /clone="H3018C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 134 c 111 g 191 t ORIGIN 1 atcagtatat tagacagcca tacatttcag taactgctta aattctgata tccagattta 61 agcatgtaag catgtgactt caaaacatac aacaaatcta ttcataattt gctatactac 121 caacattaaa ttgcagttac gttggagcct aagtcgaaca gaaagcctgg aacagaccta 181 aggagcacct tccctggatt atacatgcaa atcacccctc cacgtacaga tctcatcact 241 ttcatttgta agttacttgg gctttggaag tcactacacc caagcaaggg cttatcatgg 301 tttgagaagg ggaaaaaggt gatcatgttt tctgtttata tatatatctt aaaaattgca 361 cagcagaagg ggatgcaatc tagaagagca agcccttaag cagtagctta tgataaactt 421 ctttaggaat gaatcatttc tatcactaat aacacaggcg aaatgtatta tgccaccttc 481 tagtaatggc tgagacaata caatgcaaag gcatcacaat tggttcactt catataacta 541 gacagaccga catgtaacta attgttttct tttgattacc agttaaatac agaattttaa 601 tcccatagct taacaatgaa gggtcataca acacatacct agcatgtcag tctaatgtac 661 acagc //