LOCUS CK334295 585 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014A06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014A06 5', mRNA sequence. ACCESSION CK334295 VERSION CK334295.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 585) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3014 row: A column: 06 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..585 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014A06-5" /db_xref="taxon:10090" /clone="H3014A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 146 a 152 c 184 g 103 t ORIGIN 1 cgtcagtata aactcctgga ttgagctgga agaggaccac ctagcgcggg tggaggaggc 61 catcacccgc atgctcgtgt gtacactgaa gactgcagag gacccgcacc accccaggac 121 ctggctgaac cccactgagg ttgaggagac atctcacgag gtcaacagct gctacttgaa 181 cagtgctgtt tgtgcctttt ttgatcattg tgaaaaagct aaaacagtag agttgcaagt 241 gctgagcgca aacggggcgg agccacgtgt gcaggaggag cacatggaag tggagcaggc 301 ccagggcccg agcctcacat cgagggctga gaaacaggag gccgtgagcc tgtttggccc 361 agatctgatc cctgtgacac cagcatccga agagagagga ggcgcactgg aaggcgacag 421 cgaagaatct gtcagcagta atggaggaca ctttgcagaa ctgccctgtg ccaggagaca 481 gcaaaccagc aaaggggcga gcgcattgac ggagcccttg gccccgaggg gtcctatggc 541 gcattctcga gtcttcgtgt ccacagatga cttgctggac tgcct //