LOCUS CK334250 696 bp mRNA linear EST 12-MAY-2010 DEFINITION H3011H10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3011H10 5', mRNA sequence. ACCESSION CK334250 VERSION CK334250.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 696) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3011 row: H column: 10 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..696 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3011H10-5" /db_xref="taxon:10090" /clone="H3011H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 155 c 177 g 151 t ORIGIN 1 ggctgttcca gagaagaaaa agaaggttgc cactgtgcca ggaaccctta agaaaaaggt 61 tcctgctggg ccaaaaactc tcaagaaaaa ggttcccgct gtgccagaaa ccctcaagaa 121 aaagcgaagg aatttcgcag agttgaaggt gaagcgcctg aggaagaagt ttgccctgaa 181 gacacttcga aaggcaagga ggaagctcat ctatgagaag gcaaagcact atcacaagga 241 gtacaggcag atgtaccgca ctgagattcg gatggccagg atggcaagga aagctggcaa 301 cttctatgtg cccgcagaac caaagctggc ctttgtcatc agaattcgag gtatcaatgg 361 agtaagccca aaggttcgta aggttctgca gctccttcgt cttcgacaga tcttcaatgg 421 cacctttgtt aagctcaaca aggcttcaat taacatgctg cggattgtgg agccatacat 481 tgcatggggg taccccaacc tgaagtcagt aaacgagctc atctacaagc gaggctacgg 541 caaaatcaac aagaagcgga ttgccttgac agataattcc ttgattgctc ggtctcttgg 601 taagtttggc atcatctgca tggaggatct aattcatgag atctatacag tcgggaaacg 661 cttcaaggaa gcaaataact tcctgtggcc cttcaa //