LOCUS CK334249 648 bp mRNA linear EST 12-MAY-2010 DEFINITION H3011H07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3011H07 5', mRNA sequence. ACCESSION CK334249 VERSION CK334249.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 648) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3011 row: H column: 07 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..648 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3011H07-5" /db_xref="taxon:10090" /clone="H3011H07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 179 a 145 c 127 g 197 t ORIGIN 1 cggagaccac tttcttagtg gacaaatacg aaatcctgta ataccaagaa gggaaagctg 61 aaaaggaagg atttcagatt aataaagaag aagccaaaag tggctgaaga gttttccaaa 121 tttacaagcc attggaggtc ccccaacccc cttttctgat acagtgcacg ttctctgcgc 181 gcaaggaccc tcaactcaca cccagtgttg cggtgtcaca gagacatttt tgacaaatga 241 cactgacata aagggaaagg ctgctgattt ctttggccag caggaagcca gctctccagg 301 gaatggaatg ccccagtaaa tagctcttct gccttcacct aagtcttcct ttattttaag 361 ccctaaatat aggtatattt catactttgt tttaaaaagt tttctctatg gatttgagtc 421 tttcacaccc ctttgctttc tgttttcttt cagtacactt agtcacacac tggggtcatc 481 tgtctgttgt actgtgttca gcactctgag aacaaggtta tctaacccat tcttgacatt 541 agacagtacc agtgaactgc ttaagggatg tagagtctag aagttgaaat acaaggttgt 601 cttgttttct ctcctgtatc catccattgc tccatctctt tatgaagt //