LOCUS CK334147 651 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007B07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007B07 5', mRNA sequence. ACCESSION CK334147 VERSION CK334147.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 651) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: B column: 07 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..651 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007B07-5" /db_xref="taxon:10090" /clone="H3007B07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 193 a 164 c 171 g 123 t ORIGIN 1 cactatctgg agacactaag ctgacacttg ggctttcata agaaaagctg ggaatagctc 61 acagcagtca ttaatccagt atatacagca gagccagagc cagctgcacc ctgtttatga 121 cacaggatca gatcgtcacc agcttccatt atcgtgggcc cacaagatgg ccaggctgaa 181 gatgggaacc acccccgcaa ggagaccagg aagaagatgg ggactcccca agaagggcag 241 gaggaagcca gggactcccc caggaagaca acgaggaagt cagaaattcg agttgtcaag 301 ggactgtgct atcgggaagg tcagcagtgt cccctctgcg ctgaactgga taggaagctg 361 atacatggct gtcttcttcc tctggcatca ggcacggggg aaatggatac cactcctcaa 421 gaggggtgaa cccgattgat gagccagaag ttgcctaggg aagctgagaa gaggtggcaa 481 gtatccagtc cttcacacac acacacacta ctggaactct tccccagaga tgtcaactca 541 cctcacaaaa ctggaagaca cgttcatccc catactgaat ttcacctttt gaaaaaaaat 601 gtcattaaaa atgcaccccg aggggctggg gagacagtgg ttcagcggtt a //