LOCUS CK334138 606 bp mRNA linear EST 12-MAY-2010 DEFINITION H3007A05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3007A05 5', mRNA sequence. ACCESSION CK334138 VERSION CK334138.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 606) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT Contact: Dawood B. Dudekula Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov Plate: H3007 row: A column: 05 Seq primer: M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..606 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3007A05-5" /db_xref="taxon:10090" /clone="H3007A05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 156 a 130 c 151 g 169 t ORIGIN 1 atcgtggtgt cacttatgcc tcgtctgcca cattgcattt gattttctga cctggttcct 61 gcacaactgc ccggtttctg ggaaaggctc agatgttacc tttgctcctg aggttaggaa 121 gctacttctt ggaaggtaaa tacaacagta gatcatactt catgccacgg agtgcccctg 181 agacctggag tggctggtga acccttaata gcatttaagg gcctgtctgc ttgtctctgg 241 aaacatcatt agtaaggcct gcgccctctg gactgcttgg gcattagaat tgacagggtc 301 attaacttct ctcctgcata gatttctggg agatgtatgt ttgtgctgtt caggctactt 361 gaaagcagag agcagagaac attacctgtg ttcgatttga cacagggtgt cagccacact 421 ggaaaacccc ttgcagaggt aacacctctt gagaaggaat agccagttta gcattcctac 481 tagaaaatta cagtagataa ggccagttgg ctcgtgatag gagttatatt actcaagaag 541 tgctagtgtt gaaccggaag ccaacattta gcctgaggcc aaaatgaggt acctgagaag 601 agattt //