LOCUS CK334116 656 bp mRNA linear EST 12-MAY-2010
DEFINITION H3006B06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3006B06 5', mRNA sequence.
ACCESSION CK334116
VERSION CK334116.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 656)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT Contact: Dawood B. Dudekula
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
Plate: H3006 row: B column: 06
Seq primer: M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..656
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3006B06-5"
/db_xref="taxon:10090"
/clone="H3006B06"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 166 a 156 c 190 g 144 t
ORIGIN
1 cttccgggtc gaaggggctt cgttccggga aatacaaatt tctaggagtg cggaagtgag
61 gctggtgccg gtgagtccgg tggcttaaac aggcatgaag atcaccaggc agaaacacgc
121 caagaagcat ctcggctttt tccgcaacaa tttcggagtc cgcgagccct accagatcct
181 tctggatggc actttctgcc aggcggcgct gcggggtcgc atccagctgc gggaccagct
241 gccccgctac cttatgggag agacccagct gtgcaccacg agatgtgtgt taaaggagtt
301 agaaacactg ggaaaggaat tatatggagc aaaactgatt gcacagaaat gccaggttcg
361 aaactgtcct catttcaaga gcccagtgag tgggtctgaa tgtctcctgt ccatggtgga
421 tgaggggaac cctcatcatt attttgtggc cacacaggat cagaacttat ctgtgaaagt
481 caagaggact cctggaattc ctctcatgtt cattattcag aacactatag tgttggacaa
541 gccttctccc agaacagtgg cctttgtgaa ggcggtcgag gcgggtcagc tggtctcagt
601 gcacgagaaa cagagtatca agcaactgaa ggaggagcaa ggcctggtgc ggaacc
//