LOCUS BG088713 630 bp mRNA linear EST 12-MAY-2010
DEFINITION H3156F06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3156F06 5', mRNA sequence.
ACCESSION BG088713
VERSION BG088713.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 630)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG088713.1.
Other_ESTs: H3156F06-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3156 row: F column: 06
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..630
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3156F06-5"
/db_xref="taxon:10090"
/clone="H3156F06"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 167 a 133 c 178 g 152 t
ORIGIN
1 ccagagcagg acaccggtgc tccaagggtc atctttaagg actggcgaaa ttcatgagta
61 gtgagggcga gtggattaag caattaggaa gtgagatgct gctgtctgaa ggagaggctg
121 tggaaaggga tgccaggcac atgcagtcca gcaagtgtgt gcagaggaat gcaggaatgt
181 gtgtgtaagg acctgggtgt tcatggggca gctgagacac tggccttcat tcccaagtgg
241 gtacaatacc cagagcctcg tcaagccaag acttaaacaa gcaggctccg tgtaaggtta
301 gggatatgag acctgggaga cacagaggac ccactcagga gtatacataa gggactattc
361 tggtttctct tctttattca tcttgtcata tttggcttat aatctggacc ctgtcaccat
421 tagtcatcat agaaatacaa taaagagaaa ctatagaacc ctctggtatc ggggaacttc
481 ccccaggggt atgaagatct gaaggggagg ggacgtgctt ctgtgaagtg ctgagctgca
541 catggaaatg ttgaagtagc ttttgaagcc cttttactcg acgtgtgtct gtccgcatca
601 cctctcacaa gcctcctgtc agggtcccat
//