LOCUS BG088708 688 bp mRNA linear EST 12-MAY-2010 DEFINITION H3156E10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3156E10 5', mRNA sequence. ACCESSION BG088708 VERSION BG088708.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 688) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088708.1. Other_ESTs: H3156E10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3156 row: E column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..688 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3156E10-5" /db_xref="taxon:10090" /clone="H3156E10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 158 a 195 c 173 g 162 t ORIGIN 1 gttactggta tggaacacag acatggcggg gccccagaag gcctttgtaa ctgtttcttc 61 aactcttgca tccctgaagg gaagatgctc ttggatgcac ctgtaatatc ttagttactg 121 aatgggaagc tgtaggggcc gaggagggca gagggtatag gaagtgagaa cgaggcctgt 181 gtcgcagcag cccagcatca agcatgtcac acactgccct gccacagcca cctccctccc 241 tggccatccc agagccgagg ctcccactgt cctcagagag cctgcatgga aatgctgtcc 301 tcttccactc tcctcctctt tttgataccc accctcacta gctgcctcca gctctggagt 361 ggggtgctat tctggcagta tctggaactt ggcctacagc ttcctctgca gggtctaaac 421 agggaaggca cgtgtggagg agtggtccca gtgacatcca ggcaccattc agcacaacac 481 tgggaagtga ttcttccctc aggcccctct gcctaccaac acctgggctc ctcactgggg 541 gaaacaaaag cctataaacc ccagcaacaa aacctagtcc tcttagacgt tcttgcgctt 601 tgattttttt agggcgtgtg ccctgttaca cttatagggc ctaggatgct tgtgttgagt 661 aaaaaggaga tgccccaata ttcaaagc //