LOCUS BG088475 600 bp mRNA linear EST 12-MAY-2010 DEFINITION H3153E11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3153E11 5', mRNA sequence. ACCESSION BG088475 VERSION BG088475.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 600) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088475.1. Other_ESTs: H3153E11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3153 row: E column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..600 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3153E11-5" /db_xref="taxon:10090" /clone="H3153E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 214 a 132 c 104 g 150 t ORIGIN 1 aaaaaaatat ccaataaaga aacaaaaaaa aacaaaaaaa aacaaaacca atgcttgcac 61 tgaggaaatt agctattgat ttgaggtagg ggataaattc ctatacttcg caccgtacac 121 ttaaaactgt tgtcacatta aaactgccgg ttccacagtg actagcccag gtaggaggac 181 aaggtgacaa ggagaatgcc atattcttta gaaacaaatg aactacaaga caaagcaaca 241 aacacatcca aaaaaaaaaa ccaaagggcc attggtacaa aacgatggct ctgagtccta 301 gtattagatg gtgcctacca tactgttttg tttttacatt gtgagacata tcttactttg 361 tagccaagga tggccttcaa ctcatgacta tcctcctacc ttggcatttt gattgctggg 421 agtacagaca tgaacaacca tgctggactc cacaaattta ctcttactat aaaacttaag 481 gaataaagag agcccaagct ctctctgtcc ctgttacctg tcaccaccat aagcttctct 541 cctctctgta acacaaaagg aactttactt agacttcgtg acactgtgcc tggtggaaac //