LOCUS BG088440 598 bp mRNA linear EST 12-MAY-2010 DEFINITION H3153B07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3153B07 5', mRNA sequence. ACCESSION BG088440 VERSION BG088440.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 598) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088440.1. Other_ESTs: H3153B07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3153 row: B column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..598 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3153B07-5" /db_xref="taxon:10090" /clone="H3153B07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 157 a 98 c 141 g 202 t ORIGIN 1 tcagaatttg cttttgtttc ggttttttgg agcctgggga tccagaacct gaagtactcc 61 aggcgagcgc tctaccattg agctgcgcct ccagcctgaa ttgaagtttg agcaaagtac 121 agtgtttgca actccaactg gaagtttttt aaagttcttc aagtagtaaa gtaggttagc 181 tttgtttgga tgagtaactg gtactagtta tgttatctta ccatctgaca tgcgactttg 241 gtattttctg cttcttaagg aaattatgaa atatgtaaaa cttagtgact tcctaggtaa 301 gaagaaaact tgacattttc aaaggctgtg aatttttctt ggagggattc tacccccggc 361 ccccagtagt tgctttaagt gtataagccc accagttcca gatgataggg gattatggag 421 tcatggttcc cctcatttga ggaagagtgg gcctgtgttg tgaccaggag tgagggaagg 481 tgaacagagt tatttttgtt tgtttgtgca aattattttc tatattaact ctttaagcat 541 taatgtataa ccggaaattt taagatgcat gttattgtaa gcgcaacata gtggtgat //