LOCUS BG088272 680 bp mRNA linear EST 12-MAY-2010 DEFINITION H3150H10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3150H10 5', mRNA sequence. ACCESSION BG088272 VERSION BG088272.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 680) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088272.1. Other_ESTs: H3150H10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3150 row: H column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..680 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3150H10-5" /db_xref="taxon:10090" /clone="H3150H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 225 a 136 c 131 g 188 t ORIGIN 1 aattaatcct ggcctccaaa agctactatg atatcttagg tgtgccaaag tctgcctcag 61 agcgacaaat caaaaaggcc tttcacaaat tagccatgaa gtaccaccct gtcaaaaata 121 aaagccctga tgctgaagca aaattcagag agattgcaga agcgtatgaa acactctcgg 181 atgccaatag tcggaaagag tatgacacaa ttggacacag tgcttttacc aatggcaaag 241 gacaaagagg caatgggagt ccttttgaac agtcatttaa cttcaatttt gatgacttat 301 ttaaagactt taattttttg gtcagaacca aaacactcgg tctaagaagc attttgaaaa 361 ccacttccac acacgccagg atggttctag tagacaaagg catcacttcc aggagttttc 421 ttttggaggc ggattgtttg atgatatgtt tgaagacatg gagaaaatgt tttcttttag 481 tgactttgat accaccaatc gacacacagt acagactgaa aatagatttc atggatctag 541 caagcactgc aggactgtca ctcaacgaag aggaaatatg gttactacat acactgattg 601 ttcaggacaa tagttgaatc ttttcctgtt tccactaagc ccacctagtt tattcttcct 661 tactatgtct gatgaaaaaa //