LOCUS BG088195 680 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149G10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149G10 5', mRNA sequence. ACCESSION BG088195 VERSION BG088195.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 680) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088195.1. Other_ESTs: H3149G10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: G column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..680 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149G10-5" /db_xref="taxon:10090" /clone="H3149G10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 146 a 190 c 212 g 132 t ORIGIN 1 gacgggcgcg agggaggagc ttggtgacgc ctagagtggg gcggggcgag aatcaatggc 61 aagtccgagg gtcgcgagct actgatcgcc tacatagagc cggtggagca gccgctgcgt 121 ctcaggtctc ttttcccgag ccaggatctt gtgctgaaag ccatttccaa agtgccttgg 181 gacagcctac ccctctgacc tacacagcct ggaaaagagc cactgttagc ctgtagaggg 241 gtggcctgaa ccagctcagt agctcctttg attctgggat ctgcactgaa cttgatctcc 301 atggcacacc ggctgcagat gcgtctgctg acgtgggatg taaaggatac tctgatcaag 361 ctccgccgac ccgtcgggga ggaatatgcc agcaaggccc gggcccatgg agtggtggtg 421 gaagacataa ccgtggaaca agccttcagg caggcatacc gggctcagag ccacaacttc 481 cccaactatg gcctgagccg tggccttact tcccgtcaat ggtggaagga cgtggtccta 541 cacaccttcc gcctagcagg ggtcccagat gcccaggcca tgactccagt tgctgaccag 601 ctatacgaag acttcagcag ccctttcacc tggcaggtgt tggagggggc tgagatgacc 661 ctgaaggggt gccgtaagcg //