LOCUS BG088027 632 bp mRNA linear EST 12-MAY-2010 DEFINITION H3147G03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3147G03 5', mRNA sequence. ACCESSION BG088027 VERSION BG088027.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 632) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG088027.1. Other_ESTs: H3147G03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3147 row: G column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..632 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3147G03-5" /db_xref="taxon:10090" /clone="H3147G03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 115 c 158 g 160 t ORIGIN 1 gatcttgaat ggtggtgaat ctcctaagca aaaaggacaa gaaatcaaaa ggccccctgg 61 tgatgttctc gagacattca atttcttaga aaatgctgat gacagtgatg aagaagaaaa 121 tgacatgatt gagggcatcc cagaaggaaa agacaaactt cggatccata agcacaaaat 181 aggtaatgaa ggtttagctg ctgacttaac tgatgatcca gatactgagg aagcactgaa 241 agaattcgac tttttagtga ctgcagaaga tggtgaaggg gctggtgaag cacggagttc 301 aggggatggt acagaatggg ctgaaccaat aacgtttcca tctggaggag gcaagtcatt 361 tattatgggt tctgatgatg ttttgttaag tgtactgggc cttggagacc ttgcagactt 421 gacggtaaca aatgatgcag actatagtta tgatttgcct gccaataaag atgcctttcg 481 aaagacttgg aaccccaaat acacactacg tagtcatttt gatggtgtga gagcattagc 541 ttttcatcct gtagagcctg tgctcgttac tgcctctgag gaccacaccc tgaaactttg 601 gaacctgcaa aagacagttc ctgccaaaaa ga //