LOCUS BG087250 651 bp mRNA linear EST 12-MAY-2010 DEFINITION H3137C11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3137C11 5', mRNA sequence. ACCESSION BG087250 VERSION BG087250.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 651) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087250.1. Other_ESTs: H3137C11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3137 row: C column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..651 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3137C11-5" /db_xref="taxon:10090" /clone="H3137C11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 149 a 220 c 183 g 99 t ORIGIN 1 gacaccaggc gtggatagca ccaggcctaa cagcacctct agtcgggaag ccgagccacg 61 caagggtgag ccggcctacg agaaccccaa gaagaacgcc gaggtcaagg tcaaagagga 121 acgcaaggaa gatcacgacc tacctactga ggccccccag gcccacagga cctcagaggc 181 acctccgccc agctcctcag ccagtgccag cgtgcaccca gggcctctgg catccatgcc 241 catgaccgtg ggagtgactg gcatccatgc cttgaacagt atcggtagtc tgggcaggac 301 acgtatggtg accccattta tgggcctcag tccgatccca ggaggagagc gtttcccata 361 cccctctttc cactgggacc ctatgcggga ccccttgagg gatccttacc gtgacttgga 421 catgcaccga agagaccctc tgggcaggga ctttctgctc aggaatgacc ccctgcaccg 481 gctctccaca ccccggttgt atgaagccga ccgatcgttc cgggacaggg agcctcatga 541 ttacagccac caccaccacc accaccatca cccgctggcc gtggaccctc gacgggagca 601 cgaacgagga ggacacctgg atgaacgcga gcggctgcac gtgcttcggg a //