LOCUS BG087086 602 bp mRNA linear EST 12-MAY-2010 DEFINITION H3135D04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3135D04 5', mRNA sequence. ACCESSION BG087086 VERSION BG087086.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 602) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG087086.1. Other_ESTs: H3135D04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3135 row: D column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..602 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3135D04-5" /db_xref="taxon:10090" /clone="H3135D04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 170 a 141 c 143 g 148 t ORIGIN 1 aaatggcggc ccccgtacct cggggcttgt cctccttata caggactttg ggatggtggt 61 ctcggcagcc catactggtg actcagtcca caactgtagt tcaagttaaa accaaaagcc 121 gttttagacc cccaactcct gaacccaagt acaaaacaga gaaggagttt ttggagtatg 181 ccaggaaagc gggattggtc attccacagg aacggttgga gcgccctata catttggcct 241 gtacagctgg tatatttgat ccctatgttc caccagaggg tgatgctcga atgtcatctc 301 tttcaaagga aggattgacg cagagaactg agcgattgag aaagaatgcg gcatcacagc 361 tggcaatcca aaagataaga gaatttgatg caaattttaa aacaaaagac ttccctgaaa 421 aagctaagga tattttcatt gaagctcacc tttgtctaaa caactcagac catgaccggc 481 ttcatacctt ggtaaccgaa cactgttttc cggacatggt ctgggacctc aagtacaaga 541 ctgtacgctg gggctttgtg gaatctctag agccagccca agtggttcat gtccgttgct 601 ca //