LOCUS BG086706 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3129F02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3129F02 5', mRNA sequence. ACCESSION BG086706 VERSION BG086706.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086706.1. Other_ESTs: H3129F02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3129 row: F column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3129F02-5" /db_xref="taxon:10090" /clone="H3129F02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 121 c 124 g 249 t ORIGIN 1 aaccattggg ccacaagtgc tttgagttta tcagtagtga atctgccaaa gttggtattt 61 ttaacattga gtatgtaaga tgtcaaaagt gagcagaggt ctgggtctgc agacagcaga 121 aagttttatc tcagtgtatt ttacagcctc taagacctca gtgacaagtc ccttccgatg 181 gtgacttgtc ttttaaccac ttgttttcca cagtgctacc tgtggttagc aaactgtgtg 241 catcatcctc tgccttactg tttgatgtct tacatccaaa agaaacgcta aaacccatag 301 cctttgaaga catggaaaat ggcatttttc agatttctag aagttcagtg tcctgcaaca 361 aaacaggaac ccccttaact ctatggacct catttcaata tactgtttac agtttgacgg 421 aattgtataa tttaatattt ctcttgtact gtagtgaata tttatttaca gatttttttg 481 tactgtgtga tttgaacttt ttgttcctgc tataatcatt tgtttatgta gtagagcact 541 tatgatcaca cgttaagttt ttgggtttga ttgcactaca ttaaattttt aattcagttc 601 tgattttgac tggactaaaa taagctgtct taatgtatgt gatgagtact taaattttaa 661 tccatgtggt tccccttc //