LOCUS BG086648 530 bp mRNA linear EST 12-MAY-2010 DEFINITION H3128H03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3128H03 5', mRNA sequence. ACCESSION BG086648 VERSION BG086648.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 530) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086648.1. Other_ESTs: H3128H03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3128 row: H column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..530 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3128H03-5" /db_xref="taxon:10090" /clone="H3128H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 142 a 115 c 140 g 133 t ORIGIN 1 aatggctatt aatagtatta gatcattaca acttatgtaa ttttcaaagg ttgtacgatt 61 ataaaggaaa gaggcaaagc atagataaca cagagcccga ttaaaataaa ttggcattgg 121 agtgcttcac cctttagcta tttgacttag aatgtaactt gatactgccc agccactgag 181 cctcagcgtg tctgcactgc cgggggccct gggacggccc ctgctttcca gcatcatgtt 241 tgactggagc cggagtcctg gggaaggtgc acgggtggca gagagtagga aactgagttg 301 gcctgcataa taggatggag cacacagtta cttacctggc cttagctgga cagccagggc 361 acagagcaga gcaaggtcgc actgcaggct tgcttttagt cttgaatgtg aggtttttcg 421 ctaagtcagg ccatccagac cagcaccaca gcagaggtgg gctaccacac ctctggactt 481 ggagactggt tcagcatggt gcttcctttt gtttcttaaa gaaaagaaat //