LOCUS BG086507 685 bp mRNA linear EST 12-MAY-2010 DEFINITION H3127A11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3127A11 5', mRNA sequence. ACCESSION BG086507 VERSION BG086507.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 685) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086507.1. Other_ESTs: H3127A11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3127 row: A column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..685 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3127A11-5" /db_xref="taxon:10090" /clone="H3127A11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 215 a 141 c 143 g 186 t ORIGIN 1 gaagagggag tttgacaacc ctgacaccgc agacctcaag tttctggttg atggaaaata 61 catttatgct cacaaagtcc ttctcaaaat taggtgcgaa cattttcgtt cttcattaga 121 agacagtgaa gacgatattg tagaaatgag cgagttttcg tatcctgtgt tccgagcttt 181 cctggagtat ctatacacag ataacatcag cctatctcct gaggaggcag tagggttgct 241 agatctggct acattttaca gtgagactcg gttgaaaaag ctctgtcaac aaactatcaa 301 gcaaggaatc tgtgaggaga atgctattgc tctgctctct gctgctgtca agtatgatgc 361 ccaggactta gaagagttct gcttcaggtt ctgcatcaac catctgactg tagtaacaca 421 aacgtcaggc tttgcagaaa tggaccacga tcttctaaag aactttatca gcaaagccag 481 cagagttgga gcctttaaga actgatcctg aatgtggaaa agaatgctta agccttccca 541 tttcacccca gcaaagataa ataaataaat gaataaatag taattaccaa aaaaagccat 601 tgacgaacaa cttctctgta actaacagtg ttgatgagaa ctacatctgg ccagattctt 661 gtcttctgtc aaaaggctgt agtca //