LOCUS BG086498 742 bp mRNA linear EST 12-MAY-2010 DEFINITION H3127A02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3127A02 5', mRNA sequence. ACCESSION BG086498 VERSION BG086498.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 742) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086498.1. Other_ESTs: H3127A02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3127 row: A column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..742 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3127A02-5" /db_xref="taxon:10090" /clone="H3127A02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 237 a 122 c 141 g 242 t ORIGIN 1 ggttgagctg tcccgtttga ctagtgaaga ccgagctgtt cctttagtgg tagagaagct 61 cataaactat attgaaatgc atggacttta tactgaaggt atttaccgaa agtctggttc 121 aactaataaa atcaaggagc ttcgacaagg tctagataca ggtaagatag tatgccctga 181 atcaagatgt aacacttatt ttaaaagtta tttcactttt atattctgct tctctaaatg 241 tagggccaga acattttggg gtatttcttt gccatttttg agtctttggc tgtatttagt 301 aaattcatca aacatgtacc aacagtatca attatagaaa gtttgttagg tacttgaaaa 361 agatcttaat ctatttaaca gactaattag atcctgttat ccttaattta tggggaagaa 421 aaatgtaggt tcaaggaaat taatagaatg ttgatgcaag gtaacaaaga ttcttagaaa 481 cagttttgag aactcagaga cgtcatttat ctgcatttaa aggtaaggaa tcaaactgac 541 aaaggaattc atctaactgc ttatcaccaa ccagtgacaa caatttaatc ccgtgttctc 601 tgaatccata ctttaaagtg cttcctgtta agtcttcagt gtcctgaccg cagacaggat 661 tctttgtaat agatatccct agtgcccatg tatattgagg acttggttat gagtgtacca 721 tttagtccca gggtacatac aa //