LOCUS BG086384 497 bp mRNA linear EST 12-MAY-2010
DEFINITION H3125D03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3125D03 5', mRNA sequence.
ACCESSION BG086384
VERSION BG086384.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 497)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG086384.1.
Other_ESTs: H3125D03-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3125 row: D column: 03
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..497
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3125D03-5"
/db_xref="taxon:10090"
/clone="H3125D03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 123 a 121 c 130 g 123 t
ORIGIN
1 ggaccctgaa tatctcagag ggtcttctga taggaaagaa cacataccat cagcttgctg
61 tgaaggtcaa aagaaacagg tgtagctcca gcacccagga atcagtcagg aaggctgtaa
121 gggtcatgtt gagttgtcta ggctcagacc taccctgtgc acatgctggc cttcagtctc
181 cctgtaaaat gtcaaggact gaagcttagc gagatctcag gtgcccttgc agaccttgtc
241 agtccgagga acagactatt tctctccagc aatgcagccc gctcatcacg gaaacagccc
301 cgacgtccat ccttcctgct tgagcgtttg gggagtcaga ggtccccaga gtggtacagc
361 cttggggagc agcagtaagt tgaatggttg tgagtccaaa ggcactgaaa actatgtgtt
421 cctatatttt atgggatgtc tggtcccttt aatccagaga aaggttccat ggtgtgagca
481 gcttctgctt ctgctca
//