LOCUS BG085642 670 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115G08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115G08 5', mRNA sequence. ACCESSION BG085642 VERSION BG085642.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 670) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085642.1. Other_ESTs: H3115G08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: G column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..670 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115G08-5" /db_xref="taxon:10090" /clone="H3115G08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 139 c 178 g 154 t ORIGIN 1 gtttcttcag tcaggggcac ttatgaatgc attgctacca gctcctcggg ctcagagaga 61 agggtagtga ttctaagagt agaagagcaa gagaccgttc ccaggataga aactgcctcg 121 cagaaatgga cagaggtgaa tttgggtgag aaattactac tgaactgctc agctactggg 181 gatccgaaac ctacaataat ctggaagtta ccatccaagg ttgtcattga ccagtggcac 241 agaatgggca gccggatcca tgtctaccca aatggctcct tggttattgg atcggtgaca 301 gaaaaggatg gtggtgacta cttatgtgtg gcaagaaaca aaatgggaga tgacctggtc 361 ctgatgcatg tccgcctaag actgacacct gccaaaattg aacacaagca gcattttaag 421 aagcaagtac tccatgggaa agatttccaa gttgactgca aggcttctgg ctcccctgtg 481 cctgaggtat cctggagttt gcctgatgga acagtggtga acaatgtagc acaagctgat 541 gacagtggct acaggaccaa gaggtacacc ctcttccaca acggaacctt gtatttcaac 601 aaagttggga tggcagagga aggagattat atttgctctg ctcagaacac cttagggaaa 661 gatgaaatga //