LOCUS BG085454 604 bp mRNA linear EST 12-MAY-2010 DEFINITION H3113D12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3113D12 5', mRNA sequence. ACCESSION BG085454 VERSION BG085454.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 604) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085454.1. Other_ESTs: H3113D12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3113 row: D column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..604 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3113D12-5" /db_xref="taxon:10090" /clone="H3113D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 217 a 108 c 136 g 143 t ORIGIN 1 aaggaattta atgaagataa tggttttagt ttgtttggca cgactcttca gacacatgtg 61 tctactcatg agaagtgtga ccagagcagt ttccgggaag cgtgtaataa aattctggat 121 tcctatgaaa tgtttaattt gcagtcaaaa gctgtgaaaa gaatagctac tctagaaaat 181 aaaaccagac aaaaccctgg tgattcagaa actatcagaa aaaagacagt gggctcattg 241 tacacagatg catcggatgg cccgtgctat agtaaatcgg tagagtctgt tttacaggac 301 agcaacaaca gtgcttactt agaaccgagg gtgtcagaag aagaggtagc caaaacatca 361 cactccggag aaaatgagaa atggaaaaaa tcttttttgg aaaataagac ttcaggaagg 421 atacatgaaa ccagtccaaa aatgttttca agccccatcc aaatgcatca cctccttgag 481 gagagagagg cagatctgga aatgcagaca ataagtagta ctgttaatgt catggctgcc 541 aacattcccc aaaataatga cattccgagt caactggaga aatggaaaga tgctcctgaa 601 gtgg //