LOCUS BG085203 669 bp mRNA linear EST 12-MAY-2010
DEFINITION H3109G04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3109G04 5', mRNA sequence.
ACCESSION BG085203
VERSION BG085203.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 669)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG085203.1.
Other_ESTs: H3109G04-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3109 row: G column: 04
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..669
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3109G04-5"
/db_xref="taxon:10090"
/clone="H3109G04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 148 a 151 c 142 g 228 t
ORIGIN
1 gcgtaccaga gcctccggct ggagtacctg cagatcccgc cggtcagccg cgcctatact
61 accgcctgcg tcctcaccac cgcggccgtg cagttggaat tgatcacacc ttttcagtta
121 tacttcaatc ctgaattaat ttttaaacat tttcaaatct ggaggctaat caccaatttc
181 ttattttttg gtccagttgg attcaatttt ttgtttaaca tgatttttct ataccgttat
241 tgtcgaatgc tagaagaagg ctctttccga ggtcggacag cagactttgt atttatgttc
301 ctttttggtg gatttttaat gactctcttt ggtttgtttg tgagcttagt ttttttaggc
361 caggccttta caataatgct ggtctacgtg tggagccgaa ggaacccgta tgtccgcatg
421 aacttctttg gtcttctaaa cttccaggcc cccttcctgc cctgggtgct catggggttt
481 tccctgttgc tggggaactc aattatagtg gaccttttgg gtattgcagt tgggcacata
541 tattttttct tggaagatat atttcccaat cagcctggtg gaataagaat tctgaaaaca
601 ccatctattt tgaggactat ttttgatacg ccagatgagg atcccaatta caacccacta
661 cctgaagag
//