LOCUS BG085160 695 bp mRNA linear EST 12-MAY-2010 DEFINITION H3109C08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3109C08 5', mRNA sequence. ACCESSION BG085160 VERSION BG085160.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 695) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085160.1. Other_ESTs: H3109C08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3109 row: C column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..695 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3109C08-5" /db_xref="taxon:10090" /clone="H3109C08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 207 a 133 c 198 g 157 t ORIGIN 1 gtgacataca aggaagtttt aatatatctg gaaatctcca tataaacgac actgaatgcc 61 tgcatgtaca ttgccgggga gtagagacca gtttggcgga gtgtgccttt acgaagagga 121 gaactgagtt gtccaatggc ttggcggggg tagtgtgtta caagcaggat gcagatttcc 181 caacgagtct gtccttccag tgtgtgaatg ggaagcacat tcctcaggag aaagcctgca 241 acggtgtcaa tgactgtgga gaccaaagcg atgagctgtg ttgcaaaggt tgccgaggta 301 acgcttccct ttgtaagtcg ggagtttgca ttccagacca atacaagtgt aatggtgagg 361 tggactgcat cactggtgaa gatgagagcc gttgtgaaga agaccgacag cagaacattc 421 caaaaggcct tgcacggtca gctcaaggag aagctgaaat tgaaactgaa gaaacagaaa 481 tgttgactcc tggtatggac aatgaaagaa aacggataaa gtccttatta cctaaactct 541 cctgtggagt caaaagaaac actcacactc gcaggaaacg agtgatcgga gggaagccag 601 cgaatgtggg agactaccca tggcaggtgg caattaagga tggccaaaga atcacctgtg 661 gtggcattta tatcggtggc tgttggattc tgact //