LOCUS BG084979 698 bp mRNA linear EST 12-MAY-2010 DEFINITION H3107C03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3107C03 5', mRNA sequence. ACCESSION BG084979 VERSION BG084979.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 698) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084979.1. Other_ESTs: H3107C03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3107 row: C column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..698 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3107C03-5" /db_xref="taxon:10090" /clone="H3107C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 128 c 105 g 252 t ORIGIN 1 gttttgttga ggatgctgga catttgttgc atttaacctg aaatctacca aattagtcct 61 aattttctct ctctcttact tagcttgtct taatttttaa actgtttgca tgttatctct 121 cctaaaaaat ttaaacttat ggaaatagaa acattttaat atgacttgta atttagtgtt 181 tcttttgaca aagtagtact gcaaatgctt ttataatgta tttaaaaata tggctgagta 241 atgcagaatt catgtcttta gttttgcatt ataacagtat tgagtaagaa atgcacatgt 301 aaagagtaat tgtaagtcat gtaagacatg taagtcttcc aagttttaat tacctatcta 361 gtctattatg aactttagaa agcaaactct agtatttcat gcgcttctct atttactatt 421 cttacctccc cccatgctcc cccccacccc atacagggta tcactatata acctagactg 481 gcttcaaatt tgtggtcttt gctacttcag tttctcattg cccaagataa caggcatgga 541 ccagtatatc caactccttc aattggtttt gaccatagtt accttatgtt caaagttcat 601 agtgtaataa aagtagaaac tagtagtagg ggaagtatag agcctagatc actccattac 661 actcccagaa aattgacttc ttagatatgt actagtaa //