LOCUS BG084373 596 bp mRNA linear EST 12-MAY-2010 DEFINITION H3100A10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3100A10 5', mRNA sequence. ACCESSION BG084373 VERSION BG084373.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 596) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084373.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3100 row: A column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..596 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3100A10-5" /db_xref="taxon:10090" /clone="H3100A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 167 a 146 c 109 g 174 t ORIGIN 1 cttttctagt gtggcatgta aagtatttgg atgaatataa ccctggaata tttagacaag 61 ttcaggtttc tttttcctct cggattcctg ttgcatttcc ctctggggac gccaactctc 121 ttagtaaaaa catcatgatg tatgcttgtg tgaatgctac aaaagattca tacaacccat 181 cccagcaaga gatgatgtct gtagatagtc cccatggatc acagctacac tctccatcac 241 acagcaccga tatgaatatt ttagcaccta cggtaatgat ggtctctaaa cacatagatg 301 ggtctttgaa tcagtgggca gtcacgtttg ctgacaagtc agcctttacc actgttctga 361 ctgtgtccca caaattcaga tactgtggtc accgattcca cctcaatggc ctggcatgcc 421 attctgtttt acccctcttg ctgacatctt cccatcataa tgctctgttg actcctgaat 481 cagactgtca gtgggactcc gacagtaaag taaatagatt aatagatcct gtaaaacaca 541 caaaagcttc atcaaaacag cctctgagaa atgcagcaac ccgtacattt catgac //