LOCUS BG084263 647 bp mRNA linear EST 12-MAY-2010 DEFINITION H3098C12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3098C12 5', mRNA sequence. ACCESSION BG084263 VERSION BG084263.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 647) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084263.1. Other_ESTs: H3098C12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3098 row: C column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..647 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3098C12-5" /db_xref="taxon:10090" /clone="H3098C12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 171 c 137 g 155 t ORIGIN 1 gcgggatatc cagtttcttc gggcctcact acaggctgga gcgcgagatg tctttaagga 61 tctgcacagc gactacctca agtaccacaa ggccaagcat gaaggagaga aaagatatac 121 ggcctaggtc acaccacaga atcacctggg acaccttgca gaacattcat agttcagagt 181 cctggaggat gtaaggcttc tgacgttctc atacacgttg tcaacaacca tggaaaacac 241 acacacacac acacacacac acacacacac acagtctcac tgtatatcct tgaatggcct 301 agaactcact atgtagaaca ccaggctggc tttgaactca cagagatccc tctgctttct 361 gtatgccgag tctaaatgta tcaccttgcc caccttgggg attatatatt tttatagctt 421 ttttttttaa atgctaaatg ttctttgata tcccacccct ccagcaggat aaagattgaa 481 ccaggccctc acacacacta attgcacact tctgcggctc agccacacct gcatgcctca 541 gtgcaccttt gaaaactaag tgtggtataa gagacctgga aatcgggact gggcttggtg 601 gtgcacatct ttaatcccag cattcaggag gcagagggag gcggatc //