LOCUS BG083936 654 bp mRNA linear EST 12-MAY-2010
DEFINITION H3093G10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3093G10 5', mRNA sequence.
ACCESSION BG083936
VERSION BG083936.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 654)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG083936.1.
Other_ESTs: H3093G10-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3093 row: G column: 10
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..654
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3093G10-5"
/db_xref="taxon:10090"
/clone="H3093G10"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 288 a 110 c 85 g 171 t
ORIGIN
1 gtaaaacaat acactacgca acattaatat gccaaatcca aaaataccac aactgctcag
61 tgctatggga cattaaaaac taaggtaagt tatcacaagc ataaaataag tcacaggatt
121 atgtcaccag acagaaatat acatccgaca aaaatcttga ccaacccatg gtaaaaacaa
181 caactttgga acatttagcc tcaggtacgt aatcataaga agtaaaaaga acttttatga
241 ttatatcact ggatacatat gaatctgaca aaattcttta ctaacacatg attaaaaaaa
301 ggacccttgg aacattacca aatcaggtaa gtaatcacaa gaagaaaaaa aatgttacat
361 gacatgatta tatttctgga tacaataatt catctagcaa aattctttac taactcatga
421 tgtttaaaaa gccgtttgga acattaaaaa gtcaggtaag taatcacaag aagcaaaaag
481 aagttacatg attatattat tgaaatgcat ctggaaaaat tttatatcaa ttttaaaaaa
541 gccctctaga ttattaaaac ctcaggtaag taaacccaag aagcaaaaag atgttacatg
601 attatataac tagacaaaaa atttgacaac attctttacc aactcatgat caaa
//