LOCUS BG083861 651 bp mRNA linear EST 12-MAY-2010
DEFINITION H3093A04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3093A04 5', mRNA sequence.
ACCESSION BG083861
VERSION BG083861.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 651)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG083861.1.
Other_ESTs: H3093A04-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3093 row: A column: 04
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..651
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3093A04-5"
/db_xref="taxon:10090"
/clone="H3093A04"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 183 a 120 c 145 g 203 t
ORIGIN
1 cagttgtaga gaactttgtc agggtgcata gtacctgggg ttagctccca gcactgtgta
61 gactgggttt agtaccccgc tcctatgatc ccagcacttg ggaggctgtc cttggacagc
121 taggggatag atacaagaga cttggtctca gaaactgctt tatagaaaca taaggtaaaa
181 aataactata atgaaggtgg tttgtctgtc cattgctgag acctcagggg ctgcctggtc
241 tttgctcagg caaagagggg ctccttgatg agtggattgc aaaagcctca cttctttaga
301 tgaagcattt tttattgtac ttactcaaaa tgaggtatat ctacaacagg agtcgggtat
361 tcgtggggaa ctgcgcctcc caagtcattc tggctaattg gaaaacaggc tttttttgtt
421 gattagctct ttaactgtga caatagatgg aatttggttt gtgtatctac agctacattt
481 gtgtacgttg ggcttttttt tttttaaata caatatttta aaagttaagg ctatgtttaa
541 aattctcttc ctctttagca ttcagaaaag cagactgaag atgcaactaa aaataccagt
601 gaaaagtctt ctacacaaag aaacatagcc ttcagctcca ataattccgt a
//