LOCUS BG083854 675 bp mRNA linear EST 12-MAY-2010 DEFINITION H3092H06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3092H06 5', mRNA sequence. ACCESSION BG083854 VERSION BG083854.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 675) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083854.1. Other_ESTs: H3092H06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3092 row: H column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3092H06-5" /db_xref="taxon:10090" /clone="H3092H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 192 a 127 c 157 g 199 t ORIGIN 1 gtggtgttaa gggtcagctt actcctggag aagttacctc tgtccaaacc ccatgcttgg 61 aaaaaaatga acaaatggct tttcagctgt caccattttt ctccagtcca ggggtaacaa 121 tgccagtgcg tcttcatttg tcaccatctt acttcatcca agaagtaact attgcagaca 181 tcccgagtca gatctggaag gtaaagaaag ccaggaagag actggaagta gccttggagg 241 cagacagtct tgccaggcag gcagagaaca tgggggagca aagatgagtg gaaaacaagt 301 gttgaggcct ctgtaagttc ttgaaggaac ttttttgttt tggtttggtt ttggtgtttt 361 ggtttttcaa gacagggttt ccagatgtaa ccctggttgt cctagaaccc catctctgcc 421 tccagagttt ttaaaggcaa gtgccaccat cacccagtat tacttgtatg tctttaaata 481 ataaatttaa tatacccaac ttactccttt ttaagctttt ggaaaggcaa aagatataag 541 cggtagtgtt ttaaataatg gtgtttccag tttggatcga aatgttatgt aagagaattc 601 atgtggaaac atccttttgg tgagttgtga tccacagtag gaatctggga tagattcaac 661 agcaacctac agagc //