LOCUS BG083658 737 bp mRNA linear EST 26-JAN-2001
DEFINITION H3090F08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3090F08 5', mRNA sequence.
ACCESSION BG083658
VERSION BG083658.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 737)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3090F08-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3090 row: F column: 08
Seq primer: -21M13 Reverse
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..737
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3090F08-5"
/db_xref="taxon:10090"
/clone="H3090F08"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 129 a 200 c 139 g 266 t
ORIGIN
1 tttttttttt tttccttttt tatcggccac aacctgggtg agcttgtctc atgtgatatg
61 tcactgggta cggatgggat tctccacaca gctcacagat ggtatctttc tctggccctc
121 ctacagccag ctgggccatt tcaccaaaca aattgcccct tggccgaatt tctgtctttt
181 cttttttctt tttttccttt tttatcggcc acaacctggg tgagcttgtc tcatgtgata
241 tgtcactggg tacggatggg attctccaca cagctcacag atggtatctt tctctggccc
301 tcctacagcc agctgggcca tttcaccaaa caaattgccc cttggccgaa tttctgtctt
361 ttcttttttc tttttttcct tttttatcgg ccacaacctg ggtgagcttg tctcatgtga
421 tatgtcactg ggtacggatg ggattctcca cacagctcac agatggtatc tttctctggc
481 cctcctacag ccagctgggc catttcacca aacaaattgc cccttggccg aatttctgnc
541 ttttcttttt tctttttttc cttttttatc ggccacaacc tgngtgagct tgtctcatgt
601 gatatgtcac tgggtacgga tgggattctc cacacagctc acagatggta tctttctctg
661 gccctcctac agccagctgg gccatttcac caaacaaatt gccccttggc cgaaattctg
721 ncttttcttt tttcttt
//