LOCUS BG083132 592 bp mRNA linear EST 12-MAY-2010 DEFINITION H3084H02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3084H02 5', mRNA sequence. ACCESSION BG083132 VERSION BG083132.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 592) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083132.1. Other_ESTs: H3084H02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3084 row: H column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..592 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3084H02-5" /db_xref="taxon:10090" /clone="H3084H02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 187 a 129 c 145 g 131 t ORIGIN 1 ggaaggggtc ggaaacgtaa aatcactgtc tccagccagt ctgcatcatc atcagaagaa 61 ggctatttag agcggataga tggcttggac ttctgcagag atagcaatgc ccccttgaag 121 ttcaacaaga aaaccaaagg gctcattgat ggccttgcca aattcttcac cccttctcct 181 gatgggcgga aagcccgagg ggaagtggta gactactctg agcaatacag aatcaggaaa 241 aagggcaaca ggaaatcaag tacttcagat tggcccacag acaatcagga cggctgggaa 301 agcaaacaag aaaatgagga acggcttttt gggagccaag aaatcatgac tgaaagagat 361 atggaattgt ttcgtgatat ccaagaacaa gcactgcaga aggtcggagt aactgggccc 421 cctgatccac aagtccgctg tccctctgtc attgagtttg ggaagtatga aatccacacc 481 tggtattcct ctccgtaccc tcaggagtac tcaaggctgc ctaaattgta tctttgtgag 541 ttctgtctaa aatatatgaa aagtagaact attctacagc agcacatgaa ga //