LOCUS BG082888 597 bp mRNA linear EST 12-MAY-2010
DEFINITION H3081H09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3081H09 5', mRNA sequence.
ACCESSION BG082888
VERSION BG082888.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 597)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG082888.1.
Other_ESTs: H3081H09-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3081 row: H column: 09
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..597
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3081H09-5"
/db_xref="taxon:10090"
/clone="H3081H09"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 132 a 160 c 167 g 138 t
ORIGIN
1 gtgatagctg gagcggtagt ctggtcacac ttagccactg tgtctcttga atgtacggtt
61 ccctagggaa aaagggcttg ggaggccgcc tctctcaact gttggtttcc ttacagatga
121 tgattcctgg gacctcgtca cctgtttctg catgaagacc tttgccggcc gccccatgat
181 cgagtgtaac gagtgccaca cctggattca cctgtcctgt gcaaagatcc gcaagtccaa
241 tgtcccggaa gtttttgtct gccaaaagtg ccgggactcc aagtttgata tccgtcgctc
301 caaccggtcc cgaatgggct cccggaagct gtttctggac tgatctggag ctgtggagga
361 gataggcggg actggaaggg cctgggctct agcctccctt agttgagcac agaactcaca
421 gctctggtgc aggcagaccc tgccactcag gtgcctaagc aaaggacaag ccgtccagat
481 agaactgtac atagctagtg agcagatcaa accgtgagag ctgctgctcc agctatgttc
541 tctgcattgg aggcagacag agcaccaggt ctgcttcagc taacagtgag ggcacac
//