LOCUS BG082513 554 bp mRNA linear EST 12-MAY-2010 DEFINITION H3077A06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3077A06 5', mRNA sequence. ACCESSION BG082513 VERSION BG082513.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 554) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG082513.1. Other_ESTs: H3077A06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3077 row: A column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..554 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3077A06-5" /db_xref="taxon:10090" /clone="H3077A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 103 a 180 c 168 g 103 t ORIGIN 1 gggtgcccgg gccccccaac ccatcccccg ctcggccagc tatccctgtg ctacaccccg 61 gcctggagca cctgagacca ccgccctgca tgggggcttc cagaggcgct acgggggcat 121 cacagatcct ggcacagtgc cccgtggccc ctctcacttc tccaggctgc ccctgggagg 181 atgggcagaa gatggccagc cagcatcaag gcacccagag ccggtgccag aggagggctc 241 agaggatgaa ctcccccctc aagtgcacaa ggtataggca aggcggtagc tggttcccat 301 gctccaggat ggaggtggca gctgccctgc catcccttct gtctgccatg agagggactc 361 tctgagtgtc gcctggcccc acgtgtggtg ttttgtgtgt tcctgcctgg ccaagggagg 421 tgccaatgct gggcttacca tagtccagga agaatatgag gactaggggc acacaagagt 481 ctagcttcgt ctccaggact cccttggctc agagtgtggt gctagaaact ggtccccagc 541 ccagtcccag tact //