LOCUS BG081960 640 bp mRNA linear EST 12-MAY-2010 DEFINITION H3070H06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3070H06 5', mRNA sequence. ACCESSION BG081960 VERSION BG081960.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 640) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081960.1. Other_ESTs: H3070H06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3070 row: H column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..640 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3070H06-5" /db_xref="taxon:10090" /clone="H3070H06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 116 c 141 g 197 t ORIGIN 1 aattatttct cagttttcca aattcaaatg tctgccaaaa ttgtggcaag acctgtgtct 61 atggccaggg ggcaagactt tgttcctgtt tgcagtaaac atggatacag gacttctgaa 121 tatgaataaa tgacatgctt gggacacatc tctcatccag ggtgctcaga gactgtgact 181 tcagacactt cccatatggt tagaagtaaa gagatgtgta gtgactggga ccctgaatgc 241 ttagatagaa atgtggacta ttccaataga ctgttggacc agggacatga tggaatcaga 301 aaaacagttt ggcatttata tgtggcttct gcccagacag tatatttaga tgcttttttg 361 tgtacctata acctctctct ccagggtctt tgacttttac caaccttact accaggttca 421 gggtcaggat gatagaatag gtccaggatt ggaaagacac tgttatttta tgaaggaagc 481 aaagttccag gtgaatatgg catgtataaa ataaaagttt tcttgacacg tctttccctg 541 gtctcttgcc tgggctacat gtataacact tttgtgtggc tgatcagtta tgtgcacaaa 601 acatttacat taatgtgagg aagataaaca caaatcttgt //